The detailed information of tRNA gene sequence


Sequence ID>ENV08000858
Genome IDABMK01028537
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 43
End posion on genome 115
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggattatata
tRNA gene sequence 
GCCCCGGTCGTCTAGAGGCCTAGGACATCGCCCTTTCACGGCGAAAACACGGGTTCGAAA
CCCGTCCGGGGTAaac
Downstream region at tRNA end position 
tattaaaann
Secondary structure (Cloverleaf model)
>ENV08000858	Glu	TTC
                   a      Aaac tattaaaann
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          A A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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