The detailed information of tRNA gene sequence


Sequence ID>ENV08000859
Genome IDABMK01029413
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 38
End posion on genome 110
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctagaggaaa
tRNA gene sequence 
TCCCCTATGGTCTAGTGGCTAGGATTTCTGACTCTCACTCAGGAGGCCGGGGTTCGATTC
CCCGTGGGGGAACtt
Downstream region at tRNA end position 
tttttcgaac
Secondary structure (Cloverleaf model)
>ENV08000859	Glu	CTC
                   a      ACtt tttttcgaac
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      T A          T     AGGC
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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