The detailed information of tRNA gene sequence


Sequence ID>WENV183717477
Genome IDPDWJ01000971
Search identical group
Phylum/Class[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
Species
Start position on genome 36124
End posion on genome 36221
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcggtagcct
tRNA gene sequence 
GGAAGTGCGCAGCTTACTGGTGAGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
atcattccaa
Secondary structure (Cloverleaf model)
>WENV183717477	SeC	TCA
                   t      GCCA atcattccaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A T        C      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G A        C     TGTGGGGCGCTAAAACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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