The detailed information of tRNA gene sequence


Sequence ID>ENV08000865
Genome IDABMK01078433
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 98
End posion on genome 18
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ctttcttcta
tRNA gene sequence 
AGTAATGTGGCGAAACGGTAGACGCGTTTGATTTAGGATCAAATTCTTTCGGGATTAAGA
GTTCAAGTCTCTTCATTGCTAtat
Downstream region at tRNA end position 
ggtagcgttt
Secondary structure (Cloverleaf model)
>ENV08000865	Leu	TAG
                   a      Atat ggtagcgttt
                     A - T
                     G - C
                     T + G
                     A - T
                     A - T
                     T - A
                     G - C          T G
                    T     T T C T C     A
      C A A        G      | | | | |     A
    G       A G C G       A A G A G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TTCTTTCGGGATT
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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