The detailed information of tRNA gene sequence


Sequence ID>ENV08000870
Genome IDABMK01143571
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 101
End posion on genome 28
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnngaagtc
tRNA gene sequence 
CAAGGTGTGGCGCAGCTTGGTAGCGCATCTGTTTTGGGAACAGAAGGTCATAGGTTCAAA
TCCTATCACCTTGAtga
Downstream region at tRNA end position 
ggaataaaag
Secondary structure (Cloverleaf model)
>ENV08000870	Pro	TGG
                   c      Atga ggaataaaag
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     A
    T       C G C G       A T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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