The detailed information of tRNA gene sequence


Sequence ID>ENV08000872
Genome IDABMK01165210
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 32
End posion on genome 104
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atataacagc
tRNA gene sequence 
AGGCCTTTAGCTCAGTTGGTAGAGCGCGTGCCTTACAAGCACGATGTCATCGGTTCGATC
CCGGTAGGGCCTAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000872	Val	TAC
                   c      Annn nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C T
                    T     T G G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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