The detailed information of tRNA gene sequence


Sequence ID>ENV08000875
Genome IDABMK01172790
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 85
End posion on genome 1
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gaagaagaga
tRNA gene sequence 
GCTAGGATGCCCGAGCTGGTCCAAGGGGTGCGACTTAAGATCGCCTGCAGACTACTGCGC
GTGGGTTCGAATCCCACTCCTAGCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000875	Leu	TAA
                   a      Annn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G C C C       G T G G G     C
  G           | | |                 T T
  T         A G G G
    C C A          G     TGCAGACTACTGCGC
                    T   C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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