The detailed information of tRNA gene sequence


Sequence ID>ENV08000877
Genome IDABMK01204166
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 18
End posion on genome 93
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tgcttgatgt
tRNA gene sequence 
TCCCCGATAGCTCAGTCGGTAGAGCAGTAGACTGTTAATCTATTGGTCGCTGGTTCAAGT
CCAGCTCGGGGAGCCA
Downstream region at tRNA end position 
cttctcnnnn
Secondary structure (Cloverleaf model)
>ENV08000877	Asn	GTT
                   t      GCCA cttctcnnnn
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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