The detailed information of tRNA gene sequence


Sequence ID>ENV08000878
Genome IDABMK01225417
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 23
End posion on genome 96
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gattcatatt
tRNA gene sequence 
GCTGGCGTAGCTCAGCTGGTAGAGCAGCTGATTTGTAATCAGCAGGTCGGGGGTTCAAGT
CCCTTCGCCAGCTCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000878	Thr	TGT
                   t      TCnn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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