The detailed information of tRNA gene sequence


Sequence ID>ENV08000879
Genome IDABMK01229656
Search identical group
Phylum/Classmarine metagenome; microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 9
End posion on genome 83
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnagatagat
tRNA gene sequence 
GGCGGCATAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCTGCCGCTACtg
Downstream region at tRNA end position 
aggcattttc
Secondary structure (Cloverleaf model)
>ENV08000879	Met	CAT
                   t      ACtg aggcattttc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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