The detailed information of tRNA gene sequence


Sequence ID>ENV08000881
Genome IDABML01011701
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 52
End posion on genome 127
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaacaaaaT
tRNA gene sequence 
GGGGTCGTAGTTTAATTTGGAAGAACAACTCGTTTGCGACGAGTAGGCTGGGAGTTCAAA
TCTCCCCGACTCCATac
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000881	Ala	TGC
                   T      ATac nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C C C T C     A
      T A A        A      | | | | |     A
    T       T T T G       G G G A G     C
    T       + | | |                 T T
    G       G A A C
      G A A        A     AGGCT
                    A - T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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