The detailed information of tRNA gene sequence


Sequence ID>ENV08000893
Genome IDABML01046401
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acatcaaaac
tRNA gene sequence 
GGACCCTTAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGCAGGTCCAAGGTTCAAG
TCCTTGAGGGTCCACCA
Downstream region at tRNA end position 
tttaacaaaa
Secondary structure (Cloverleaf model)
>ENV08000893	Met	CAT
                   c      ACCA tttaacaaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G T T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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