The detailed information of tRNA gene sequence


Sequence ID>WENV183720411
Genome IDPDWJ01033741
Search identical group
Phylum/Class[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
Species
Start position on genome 2096
End posion on genome 2172
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
atatcaaaat
tRNA gene sequence 
GGCCCTTTAGCTCAGTTGGTTAGAGCACCCGACTCATAATCGGTAGGTCCCCAGTTCAAG
TCTGGGAGGGGCCACCA
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>WENV183720411	Ile2	CAT
                   t      ACCA tttttattta
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T - A          T G
                    T     G G G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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