The detailed information of tRNA gene sequence


Sequence ID>ENV08000897
Genome IDABML01061803
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 111
End posion on genome 35
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnttaaa
tRNA gene sequence 
CGGGAAGTGGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
tttaaaggag
Secondary structure (Cloverleaf model)
>ENV08000897	Pro	TGG
                   a      ACCA tttaaaggag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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