The detailed information of tRNA gene sequence


Sequence ID>ENV08000901
Genome IDABML01079706
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 85
End posion on genome 11
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agcgtaaaat
tRNA gene sequence 
GGATCGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCGGTCCGCag
Downstream region at tRNA end position 
aaagtctcnn
Secondary structure (Cloverleaf model)
>ENV08000901	Asp	GTC
                   t      GCag aaagtctcnn
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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