The detailed information of tRNA gene sequence


Sequence ID>ENV08000904
Genome IDABML01095218
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttaggcttta
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCACAGGTTCGAA
TCCTGTCGGGCGTACCA
Downstream region at tRNA end position 
tacatgagag
Secondary structure (Cloverleaf model)
>ENV08000904	Arg	TCT
                   a      ACCA tacatgagag
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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