The detailed information of tRNA gene sequence


Sequence ID>ENV08000907
Genome IDABML01114802
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 106
End posion on genome 34
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnnntcaa
tRNA gene sequence 
GGAACTATAGCTCAATTGGTAGAGCAACCGGCTTTTAACCGGTTGGTTCAGGGTTCGAGT
CCCTGTGGTTCCAtct
Downstream region at tRNA end position 
tgccacctta
Secondary structure (Cloverleaf model)
>ENV08000907	Lys	TTT
                   a      Atct tgccacctta
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     T + G
                     A - T          T G
                    T     G T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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