The detailed information of tRNA gene sequence


Sequence ID>ENV08000912
Genome IDABML01147598
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 82
End posion on genome 7
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taatcagtaa
tRNA gene sequence 
GCATCTGTAACTCAGTGGATAGAGTATCGGCCTTCTAAGCCGAGAGTCGTAGGTTCGAAT
CCTACCAGATGTGCCA
Downstream region at tRNA end position 
ttttagnnnn
Secondary structure (Cloverleaf model)
>ENV08000912	Arg	TCT
                   a      GCCA ttttagnnnn
                     G + T
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A T C C     A
      T G A        A      | | | | |     G
    G       C T C A       G T A G G     C
    G       | | | |                 T T
    A       G A G T
      T A          A     GAGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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