The detailed information of tRNA gene sequence


Sequence ID>ENV08000921
Genome IDABML01167656
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 14
End posion on genome 88
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atattataat
tRNA gene sequence 
AGGGACATAGTTAAACGGATATAACAGTGGCCTTCTAAGCCTCTATTGTGGGTTCGATTC
CCGCTGTCCCTACCA
Downstream region at tRNA end position 
taatcagcca
Secondary structure (Cloverleaf model)
>ENV08000921	Arg	TCT
                   t      ACCA taatcagcca
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T T
                    T     C G C C C     A
      C A A        A      | + | | |     G
    G       A T T G       G T G G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     TATT
                    G - C
                    T   T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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