The detailed information of tRNA gene sequence


Sequence ID>ENV08000924
Genome IDABML01182629
Search identical group
Phylum/ClassMarine metagenome ; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
Species
Start position on genome 84
End posion on genome 8
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttacatataa
tRNA gene sequence 
GCACCCATGGCTCAACTGGATAGAGCATCGGCCTTCTAAGCCGAGGGTTGCAGGTTCGAG
TCCTGCTGGGTGTACCA
Downstream region at tRNA end position 
tttaacannn
Secondary structure (Cloverleaf model)
>ENV08000924	Arg	TCT
                   a      ACCA tttaacannn
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C G T C C     A
      C A A        G      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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