The detailed information of tRNA gene sequence


Sequence ID>WENV183724704
Genome IDPJQE01052050
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 179
End posion on genome 103
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcaggcgat
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGCTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
ggatcaagaa
Secondary structure (Cloverleaf model)
>WENV183724704	Trp	CCA
                   t      GCCA ggatcaagaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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