The detailed information of tRNA gene sequence


Sequence ID>WENV183725431
Genome IDPJQF01000010
Search identical group
Phylum/Class[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
Species
Start position on genome 1573
End posion on genome 1497
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caagcgatac
tRNA gene sequence 
GCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTGCGCCA
Downstream region at tRNA end position 
tatctgcctc
Secondary structure (Cloverleaf model)
>WENV183725431	Asp	GTC
                   c      GCCA tatctgcctc
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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