The detailed information of tRNA gene sequence


Sequence ID>WENV183726267
Genome IDPJQF01142384
Search identical group
Phylum/Class[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
Species
Start position on genome 149
End posion on genome 244
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgtactttc
tRNA gene sequence 
GGAAGGCATGCGCATCCGGGCATGCGGCTGGGCTTCAAACCCAGTAGGGGGCGTCGATCG
TTCCCTGGTAGGTTCGACTCCTGCTGTCTTCCGCCA
Downstream region at tRNA end position 
ttcgtgtttc
Secondary structure (Cloverleaf model)
>WENV183726267	SeC	TCA
                   c      GCCA ttcgtgtttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        G      | + | | |     G
    G       A C G C       G T A G G     C
    G       | | | |                 T T
    G       T G C G
      C A          G     TAGGGGGCGTCGATCGTTCCCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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