The detailed information of tRNA gene sequence


Sequence ID>WENV183727332
Genome IDPJTO01028955
Search identical group
Phylum/Class[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
Species
Start position on genome 270
End posion on genome 179
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacaggcttt
tRNA gene sequence 
GGAGAGATACCCAAGTGGCTATAAGGGGACCCTCTGCTAAGGGGTTAGGCTGCGTAAGCG
GTGCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tcatgaatca
Secondary structure (Cloverleaf model)
>WENV183727332	Ser	GCT
                   t      GCCA tcatgaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A C C C       G A G G G     C
  C           | | |                 T T
  T         A G G G
    A T A          G     TAGGCTGCGTAAGCGGTGC
                    A - T
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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