The detailed information of tRNA gene sequence


Sequence ID>WENV183727746
Genome IDPJTP01000144
Search identical group
Phylum/Class[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 43836
End posion on genome 43909
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaaaatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTAGTTCGAGT
CTGGTCCCCGCTACta
Downstream region at tRNA end position 
aagaaagagc
Secondary structure (Cloverleaf model)
>WENV183727746	fMet	CAT
                   t      ACta aagaaagagc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G G T C     A
      T G A        G      | | + | |     G
    T       C G A G       A C T A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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