The detailed information of tRNA gene sequence


Sequence ID>WENV183727904
Genome IDPJTP01004905
Search identical group
Phylum/Class[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 111
End posion on genome 187
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgatcagcat
tRNA gene sequence 
GGGTCAGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGCTGGTTCGAT
TCCAGCTTGACCCACCA
Downstream region at tRNA end position 
cggtttaagg
Secondary structure (Cloverleaf model)
>WENV183727904	Ile	GAT
                   t      ACCA cggtttaagg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G + T          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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