The detailed information of tRNA gene sequence


Sequence ID>WENV183728097
Genome IDPJTP01033430
Search identical group
Phylum/Class[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 8
End posion on genome 84
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
nnnccttctg
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG
TCCGTGTGGGCCCACCA
Downstream region at tRNA end position 
aacaaacgac
Secondary structure (Cloverleaf model)
>WENV183728097	Ile2	CAT
                   g      ACCA aacaaacgac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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