The detailed information of tRNA gene sequence


Sequence ID>WENV183728134
Genome IDPJTP01042109
Search identical group
Phylum/Class[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 399
End posion on genome 323
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
CGGAGTGTAGCGCAGCCCGGTAGCGCACCTGGTTTGGGACCAGGGGGTCCAAGGTTCGAA
TCCTTGTACTCCGACCA
Downstream region at tRNA end position 
aagcttcctc
Secondary structure (Cloverleaf model)
>WENV183728134	Pro	TGG
                   t      ACCA aagcttcctc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G + T          T A
                    T     G T T C C     A
      C G A        A      | | | | |     G
    C       C G C G       C A A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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