The detailed information of tRNA gene sequence


Sequence ID>WENV183728147
Genome IDPJTP01046569
Search identical group
Phylum/Class[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 128
End posion on genome 215
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgagttcag
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTAACTCTCCGCCA
Downstream region at tRNA end position 
gttgggaaac
Secondary structure (Cloverleaf model)
>WENV183728147	Ser	TGA
                   g      GCCA gttgggaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
      T G A        G        + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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