The detailed information of tRNA gene sequence


Sequence ID>WENV183730894
Genome IDPJTS01001846
Search identical group
Phylum/Class[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 2248
End posion on genome 2172
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcccgtgtgg
tRNA gene sequence 
GGTTGGGTAGCTCAGATGGTTAGAGCGGTGGATTCATAACCCACAGGTCGGCGGTTCGAT
CCCGCCTCCAACCACCA
Downstream region at tRNA end position 
cggattttct
Secondary structure (Cloverleaf model)
>WENV183730894	Met	CAT
                   g      ACCA cggattttct
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C
                     G + T          C T
                    T     C C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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