The detailed information of tRNA gene sequence


Sequence ID>WENV183731150
Genome IDPJTS01013365
Search identical group
Phylum/Class[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 699
End posion on genome 786
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtaacatatt
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
ccttacaaaa
Secondary structure (Cloverleaf model)
>WENV183731150	Ser	TGA
                   t      GCCA ccttacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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