The detailed information of tRNA gene sequence


Sequence ID>WENV183731361
Genome IDPJTS01043567
Search identical group
Phylum/Class[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 115
End posion on genome 38
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gcgccagtgt
tRNA gene sequence 
CGGGCCGTAGCGCAGCCTGGTTAGCGCGTCCGTCTGGGGGGCGGGAGGTCGTGAGTTCGA
ATCTCACCGGCCCGACCA
Downstream region at tRNA end position 
tcgaaaaacc
Secondary structure (Cloverleaf model)
>WENV183731361	Pro	GGG
                   t      ACCA tcgaaaaacc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C T C     A
    C C G A        A      | | | | |     G
  T         C G C G       G T G A G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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