The detailed information of tRNA gene sequence


Sequence ID>WENV183731554
Genome IDPJTT01000020
Search identical group
Phylum/Class[PJTT] soil metagenome; Soil (2) enriched on wood chips
Species
Start position on genome 60218
End posion on genome 60128
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaggcatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAAAACCGT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
agataccatg
Secondary structure (Cloverleaf model)
>WENV183731554	Ser	GGA
                   c      GCCA agataccatg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGCAAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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