The detailed information of tRNA gene sequence


Sequence ID>WENV183731702
Genome IDPJTT01000111
Search identical group
Phylum/Class[PJTT] soil metagenome; Soil (2) enriched on wood chips
Species
Start position on genome 48391
End posion on genome 48464
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaaattacat
tRNA gene sequence 
TGCGGGATGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATCAGTTCGAGT
CTGGTTCCCGCTACgg
Downstream region at tRNA end position 
aagaagccct
Secondary structure (Cloverleaf model)
>WENV183731702	fMet	CAT
                   t      ACgg aagaagccct
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G G T C     A
      T G A        G      | + | | |     G
    T       C G A G       A T C A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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