The detailed information of tRNA gene sequence


Sequence ID>ENV08001007
Genome IDABMO01012426
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 3
End posion on genome 73
Amino Acid Pseudo
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GATTCTTTAACTTAATGGTAAAGTGCATTTTTGATAAGAATGAAATTTAAGTTCAAATCT
TAAAAGAATTAttt
Downstream region at tRNA end position 
aatagagaat
Secondary structure (Cloverleaf model)
>ENV08001007	Pseudo	GAT
                   a      Attt aatagagaat
                     G + T
                     A - T
                     T - A
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     A A T T C     A
        A A        A      | | | | |     A
      T     T T C A       T T A A G     C
      G     | | | |                 T T
      G     A A G T
        T A        G     AAAT
                    C - G
                    A - T
                    T - A
                    T - A
                    T + G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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