The detailed information of tRNA gene sequence


Sequence ID>WENV183731825
Genome IDPJTT01000217
Search identical group
Phylum/Class[PJTT] soil metagenome; Soil (2) enriched on wood chips
Species
Start position on genome 2554
End posion on genome 2464
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcatgcatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAAAACCGT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
gacccttgtt
Secondary structure (Cloverleaf model)
>WENV183731825	Ser	GGA
                   c      GCCA gacccttgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGCAAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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