The detailed information of tRNA gene sequence


Sequence ID>ENV08001016
Genome IDABMO01022079
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 52
End posion on genome 123
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtacctttag
tRNA gene sequence 
AGAAGATTAGGTTAGTGGTAGACCAAGGGCCTTCAAAGTTTTAAGTCGTTGGTTCGATTC
CAGCATCTTCTGggn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001016	SeC	TCA
                   g      Gggn nnnnnnnnnn
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    T     C G A C C     A
        G A        A      | + | | |     G
      T     T T G G       G T T G G     C
      G     + | | |                 T T
      G     G A C C
        T A        A     AAGTC
                    A - T
                    G + T
                    G + T
                    G + T
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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