The detailed information of tRNA gene sequence


Sequence ID>ENV08001023
Genome IDABMO01028250
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 122
End posion on genome 48
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnncT
tRNA gene sequence 
TGACCTATAGCTCAATTGGGAGAGCATTTGCCTTCTAAGTAAGAGGTTGTAGGTTCGAGT
CCTACTAGGTTAGTtt
Downstream region at tRNA end position 
tataaaatat
Secondary structure (Cloverleaf model)
>ENV08001023	Arg	TCT
                   T      GTtt tataaaatat
                     T - A
                     G + T
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTT
                    T + G
                    T - A
                    T - A
                    G + T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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