The detailed information of tRNA gene sequence


Sequence ID>WENV183733614
Genome IDPJTY01006705
Search identical group
Phylum/Class[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
Species
Start position on genome 1277
End posion on genome 1202
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcgcggcat
tRNA gene sequence 
AGGGGTTTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCCCAACCCCTGCCA
Downstream region at tRNA end position 
gtcgcacccg
Secondary structure (Cloverleaf model)
>WENV183733614	Trp	CCA
                   t      GCCA gtcgcacccg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     C C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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