The detailed information of tRNA gene sequence


Sequence ID>WENV183735658
Genome IDPJUB01000347
Search identical group
Phylum/Class[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
Species
Start position on genome 5676
End posion on genome 5752
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttattcttgc
tRNA gene sequence 
CGCGCGATGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCTCGCGCAACCA
Downstream region at tRNA end position 
atttaaaagg
Secondary structure (Cloverleaf model)
>WENV183735658	fMet	CAT
                   c      ACCA atttaaaagg
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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