The detailed information of tRNA gene sequence


Sequence ID>WENV183738671
Genome IDPJUE01000083
Search identical group
Phylum/Class[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 44944
End posion on genome 44855
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcaaaacac
tRNA gene sequence 
GGAGAGGTGCCTGAGAGGCCGAAAGGAACAGTTTGCTAAACTGTCGTACTGGAAACGGTA
CCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
cgacagcaac
Secondary structure (Cloverleaf model)
>WENV183738671	Ser	GCT
                   c      GCCA cgacagcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G T C C       G C G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACTGGAAACGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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