The detailed information of tRNA gene sequence


Sequence ID>WENV183739651
Genome IDPJUE01050623
Search identical group
Phylum/Class[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 149
End posion on genome 60
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaccgcgagc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACCGGGAACGGTA
TCGTGGGTTCGAATCCCATCTTCTCCGCCA
Downstream region at tRNA end position 
gtttcccctt
Secondary structure (Cloverleaf model)
>WENV183739651	Ser	GCT
                   c      GCCA gtttcccctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCGGGAACGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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