The detailed information of tRNA gene sequence


Sequence ID>WENV183739721
Genome IDPJUF01000002
Search identical group
Phylum/Class[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
Species
Start position on genome 321522
End posion on genome 321433
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcgcgacgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGACGGGGAACCGTC
TCAAGGGTTCGAATCCCTTTCTCTCCGCCA
Downstream region at tRNA end position 
ttataatcta
Secondary structure (Cloverleaf model)
>WENV183739721	Ser	GGA
                   c      GCCA ttataatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGACGGGGAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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