The detailed information of tRNA gene sequence


Sequence ID>ENV08001136
Genome IDABMO01136329
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 97
End posion on genome 15
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
nnntattaaa
tRNA gene sequence 
GATGAGGTGGCTGAGTATGGTAAAGCGACAATTTGCTAAATTGTTGGGTATATCCCACAT
GGGTTCAAATCCCATTCTTATTCgtt
Downstream region at tRNA end position 
agataaatat
Secondary structure (Cloverleaf model)
>ENV08001136	Pseudo	GCT
                   a      Cgtt agataaatat
                     G + T
                     A - T
                     T - A
                     G + T
                     A - T
                     G - C
                     G + T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     A
    A       G T C G       A T G G G     C
    T         | | |                 T T
    G       A A G C
      G T A        G     TGGGTATATCCCAC
                    A - T
                    C - G
                    A - T
                    A - T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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