The detailed information of tRNA gene sequence


Sequence ID>WENV183745071
Genome IDPJUL01001931
Search identical group
Phylum/Class[PJUL] feces metagenome; Chicken feces enriched on filter paper
Species
Start position on genome 3416
End posion on genome 3505
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgagggcttc
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGCTAATCCCCA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
caaaaatctt
Secondary structure (Cloverleaf model)
>WENV183745071	Ser	GGA
                   c      GCCA caaaaatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGCTAATCCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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