The detailed information of tRNA gene sequence


Sequence ID>ENV08001145
Genome IDABMO01245180
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 7
End posion on genome 79
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnatatgt
tRNA gene sequence 
GCGAGAGTAGCTTAGATGGTATAGCGTGGGTTTGTGGTGCCAGAGGTCAAGAGTTCGAGT
CTCTTTTTTCGCCttt
Downstream region at tRNA end position 
ttgtttaagc
Secondary structure (Cloverleaf model)
>ENV08001145	His	GTG
                   t      Cttt ttgtttaagc
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     A - T
                     G + T          T G
                    T     T T C T C     A
      A G A        A      | | | | |     G
    T       T T C G       A A G A G     C
    G         | | |                 T T
    G       T A G C
      T A          G     AGGTC
                    T + G
                    G   A
                    G - C
                    G - C
                    T + G
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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