The detailed information of tRNA gene sequence


Sequence ID>ENV08001146
Genome IDABMO01256371
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 83
End posion on genome 10
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ngccagtatA
tRNA gene sequence 
TGCGTCATAGTATAATTGGTATTGCGCGAGTTTGCAAAGCTCTTAGTGCAGGTTCAAGTC
CTGTTGGCGCATTtg
Downstream region at tRNA end position 
attccaannn
Secondary structure (Cloverleaf model)
>ENV08001146	Cys	GCA
                   A      TTtg attccaannn
                     T - A
                     G - C
                     C - G
                     G - C
                     T + G
                     C - G
                     A - T          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       T A T G       G C A G G     C
    G         | + |                 T T
    G       T T G C
      T A          G     TAGT
                    C   T
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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