The detailed information of tRNA gene sequence


Sequence ID>ENV08001153
Genome IDABMP01034354
Search identical group
Phylum/Classsaltern metagenome; viral fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 21
End posion on genome 96
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gggaggccaA
tRNA gene sequence 
GCGTCATTGGTGTTTAACGGTTAGCATGTCAGATTTCCAATCTGAGGGTGACGGTTCGAA
TCCGTCATGGCGTTTta
Downstream region at tRNA end position 
tgaatttcag
Secondary structure (Cloverleaf model)
>ENV08001153	Gly	TCC
                   A      TTta tgaatttcag
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     A - T
                     T - A          T A
                    T     C T G C C     A
    A A T T        G      | | | | |     G
  C         T G T G       G A C G G     C
  G         + | | +                 T T
  G         G C A T
    T T A          G     GGGT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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