The detailed information of tRNA gene sequence


Sequence ID>WENV183747446
Genome IDPPCM01002185
Search identical group
Phylum/Class[PPCM] marine sediment metagenome; marine sediment
Species
Start position on genome 6969
End posion on genome 6878
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTTGAACGCGGTAGTCTTGAAAACTATTGAGGGTTTACGCC
CTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaatatcatg
Secondary structure (Cloverleaf model)
>WENV183747446	Ser	TGA
                   t      GCCA gaatatcatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G             | |                 T T
  G         A C G C
    T T G A        G     TGAGGGTTTACGCCCTCC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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