The detailed information of tRNA gene sequence


Sequence ID>ENV08001177
Genome IDABMR01015178
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 18
End posion on genome 102
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ctaccgttac
tRNA gene sequence 
GCGGATGTGGTGGAACTGGTAGACACGCTGTCTTGAGGGGGCAGTGGCGCAAGCCGTGCC
GGTTCGAGTCCGGCCATCCGCACCA
Downstream region at tRNA end position 
tacnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001177	Leu	GAG
                   c      ACCA tacnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C G G C C     A
      C A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCGCAAGCCGT
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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